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Research Project: Hibiscus: Hybrid integrated biophotonic sensors created by ultrafast laser systems
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2015

Pollnau, M. and Hammer, M. and Dongre, C. and Hoekstra, H.J.W.M. (2015) DNA separation and fluorescent detection in an optofluidic chip with sub-base-pair resolution. In: Solid State Lasers XXIV, 6-12 Feb 2015, San Francisco, USA. Paper 93200J. Proceedings of the SPIE 9320. SPIE. ISBN 978-1-62841-410-3

2014

Hoekstra, H.J.W.M. and Hammer, M. and Dongre, C. and Pollnau, M. (2014) Sub-base-pair resolution by electrophoretic separation and fluorescent detection of DNA molecules in an optofluidic chip. (Invited) In: International Conference on Luminescence, ICL 2014, 13-18 July 2014, Wroclaw, Poland. Paper I-44. Institute of Low Temperature and Structure Research, Polish Academy of Sciences. ISBN not assigned
Pollnau, M. and Hammer, M. and Dongre, C. and Hoekstra, H.J.W.M. (2014) Sub-base-pair resolution during DNA separation in an optofluidic chip. In: 17th European Conference on Integrated Optics, ECIO 2014, 24-27 Jun 2014, Nice, France. Paper We4bR2. CNRS - University Nice Sophia Antipolis. ISBN not assigned
Pollnau, M. and Hammer, M. and Dongre, C. and Hoekstra, H.J.W.M. (2014) Sub-base-pair resolution during DNA separation in an optofluidic chip. In: Micro and Nano Engineering, 22-26 Sep 2014, Lausanne, Switzerland. Page 26. Ecole Polytechniquie Fédérale de Lausanne. ISBN not assigned

2012

Pollnau, M. and Dongre, C. and Pham, V.S. and Bernhardi, E.H. and Wörhoff, K. and de Ridder, R.M. and Hoekstra, H.J.W.M. (2012) Optical bio-sensors in microfluidic chips. (Invited) In: MRS Fall Meeting, 25-30 Nov 2012, Boston, Massachusetts. Page 486-Paper XX9.01. Program & Exhibit Guide and CD. Materials Research Society. ISBN not assigned

2011

Dongre, C. and Pollnau, M. and Hoekstra, H.J.W.M. (2011) All-numerical noise filtering of fluorescence signals for achieving ultra-low limit of detection in biomedical applications. Analyst, 136 (6). pp. 1248-1251. ISSN 0003-2654 *** ISI Impact 4,033 ***
Dongre, C. and van Weerd, J. and Besselink, G.A.J. and Martínez Vázquez, R. and Osellame, R. and Cerullo, G. and van Weeghel, R. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2011) Modulation-frequency encoded multi-color fluorescent DNA analysis in an optofluidic chip. Lab on a chip, 11 (4). pp. 679-683. ISSN 1473-0197 *** ISI Impact 5,586 ***
Dongre, C. and van Weerd, J. and Besselink, G.A.J. and Osellame, R. and Martínez Vázquez, R. and Cerullo, G. and van Weeghel, R. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2011) Modulation-frequency encoded multi-color fluorescent DNA analysis in an optofluidic chip. (Invited) In: International Laser Physics Workshop, 11-15 July 2011, Sarajevo, Bosnia and Herzegovina. Paper 3.1.1. L'Phys'11 Program. General Physics Institute, Moscow. ISBN not assigned
Hoekstra, H.J.W.M. and Dongre, C. and Pollnau, M. (2011) Modulation-frequency encoded multi-wavelength fluorescence analysis. In: 16th International Conference on Luminescence & Optical Sperctroscopy of Condensed Matter, 26 Jun - 01 Jul 2011, Ann Arbor, MI. Paper TuL2-p.15. Conference Program. University of Michigan. ISBN not assigned
Osellame, R. and Hoekstra, H.J.W.M. and Cerullo, G. and Pollnau, M. (2011) Femtosecond laser microstructuring: an enabling tool for optofluidic lab-on-chips. Laser & Photonics Reviews, 5 (3). pp. 442-463. ISSN 1863-8880 *** ISI Impact 7,486 ***
Pollnau, M. (2011) Integrated optics - guiding light into the future. (Invited) In: International Laser Physics Workshop, LPHYS 2011, 11-15 July 2011, Sarajevo, Bosnia and Herzegovina. Paper PS4. General Physics Institute, Moscow. ISBN not assigned
Pollnau, M. and Akça, B.I. and Ismail, N. and Dongre, C. and Pham, V.S. and Wörhoff, K. and de Ridder, R.M. and Hoekstra, H.J.W.M. (2011) Biophotonic sensors on a microchip for trace-gas detection, DNA and enzyme analysis, Raman spectroscopy, and optical coherence tomography. In: Joint Annual Meeting of the Swiss Physical Society and the Austrian Physical Society, 15-17 June 2011, Lausanne, Switzerland. Paper 213. Bulletin SPG / SSP 28. Swiss Physical Society. ISBN not assigned
Pollnau, M. and Dongre, C. and Hoekstra, H.J.W.M. (2011) Multi-color fluorescent DNA analysis in an optofluidic chip. (Invited) In: 1st EOS Conference on Optofluidics, 23-25 May 2011, Munich, Germany. Paper 4306. European Optical Society. ISBN 978-3-00-033713-0
Wörhoff, K. and de Ridder, R.M. and Hoekstra, H.J.W.M. and Pollnau, M. (2011) Integrated light sources and optical sensors. Fotonica Magazine, 36 (1). pp. 9-17. ISSN 1871-7802

2010

Crespi, A. and Gu, Y. and Ngamson, B. and Dongre, C. and Hoekstra, H.J.W.M. and van den Vlekkert, H.H. and Watts, P. and Pollnau, M. and Cerullo, G. and Osellame, R. (2010) Label-free detection in a lab-on-a-chip with a three-dimensional Mach-Zehnder interferometer. In: Conference on Lasers and Electro-Optics, 16-21 May 2010, San Jose, CA. CMH1. Optical Society of America. ISBN 978-1-55752-889-6
Crespi, A. and Gu, Y. and Ngamson, B. and Hoekstra, H.J.W.M. and Dongre, C. and Pollnau, M. and Ramponi, R. and van den Vlekkert, H.H. and Watts, P. and Cerullo, G. and Osellame, R. (2010) Three-dimensional Mach-Zehnder interferometer in a microfluidic chip for spatially-resolved label-free detection. Lab on a chip, 10 (9). pp. 1167-1173. ISSN 1473-0197 *** ISI Impact 5,586 ***
Dongre, C. (2010) Multi-color fluorescent DNA analysis in an integrated optofluidic lab on a chip. PhD thesis, University of Twente. ISBN 978-90-365-3070-5
Dongre, C. and Hoekstra, H.J.W.M. and Pollnau, M. (2010) Electrophoretic separation and detection of a few DNA molecules in an optofluidic chip. In: Frontiers in Optics, FIO 2010 - Photonic Sensor II, 24-28 October 2010, Rochester, NY. Paper FMJ6. OSA Technical Digest. Optical Society of America. ISBN 978-1-55752-921-3
Dongre, C. and Hoekstra, H.J.W.M. and Pollnau, M. and Martínez Vázquez, R. and Osellame, R. and Cerullo, G. and van Weerd, J. and van Weeghel, R. and Besselink, G.A.J. and van den Vlekkert, H.H. (2010) Multi-wavelength fluorescence sensing with integrated waveguides in an optofluidic chip. In: 15th European Conference on Integrated Optics (ECIO 2010), 7-9 April 2010, Cambridge, United Kingdom. ThB2. IEEE Photonics Society. ISBN not assigned
Dongre, C. and Pollnau, M. and Hoekstra, H.J.W.M. (2010) Modulation-frequency encoding/decoding for parallel detection in biophotonic sensing. In: Conference on Lasers and Electro-Optics, 16-21 May 2010, San Jose, CA. CTuB1. Optical Society of America. ISBN 978-1-55752-889-6
Dongre, C. and van Weerd, J. and Bellini, N. and Osellame, R. and Cerullo, G. and van Weeghel, R. and Hoekstra, H.J.W.M. and Pollnau, M. (2010) Dual-point dual-wavelength fluorescence monitoring of DNA separation in a lab on a chip. Biomedical Optics Express, 1 (2). pp. 729-735. ISSN 2156-7085 *** ISI Impact 3,344 ***
Dongre, C. and van Weerd, J. and Besselink, G.A.J. and Martinez Vazquez, R. and Osellame, R. and Cerullo, G. and van Weeghel, R. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2010) Advances in fluorescent detection of molecules in an optofluidic chip. In: Proceedings of the EOS Annual Meeting, EOSAM 2010, 26-29 Oct 2010, Paris, France. pp. 3437-3437. European Optical Society. ISBN 978-3-00-030509-2
Dongre, C. and van Weerd, J. and Besselink, G.A.J. and Martinez-Vazquez, R. and Osellame, R. and Cerullo, G. and van Weeghel, R. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2010) High-resolution, multi-wavelength fluorescent DNA analysis in an optofluidic chip. In: Conference on Lasers and Electro-Optics, 16-21 May 2010, San Jose, CA. CTuN7. Optical Society of America. ISBN 978-1-55752-889-6
Dongre, C. and van Weerd, J. and Besselink, G.A.J. and van Weeghel, R. and Martinez-Vazquez, R. and Osellame, R. and Cerullo, G. and Cretich, M. and Chiari, M. and Hoekstra, H.J.W.M. and Pollnau, M. (2010) High-resolution electrophoretic separation and integrated-waveguide excitation of fluorescent DNA molecules in a lab on a chip. Electrophoresis, 31 (15). pp. 2584-2588. ISSN 0173-0835 *** ISI Impact 2,482 ***
Dongre, C. and van Weerd, J. and van Weeghel, R. and Martinez Vazquez, R. and Osellame, R. and Cerullo, G. and Besselink, G.A.J. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2010) Multi-color fluorescent DNA analysis in an integrated optofluidic lab-on-a-chip. In: Proceedings of Sense of Contact 12, 8 April 2010, Zeist. FHI Federatie Van Technologiebranches. ISBN 978-90-74702-56-0

2009

Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Martinez-Vazquez, R. and Osellame, R. and Ramponi, R. and Cerullo, G. and van Weeghel, R. and Besselink, G.A.J. and van den Vlekkert, H.H. and Pollnau, M. (2009) Fluorescence monitoring of microchip capillary electrophoresis separation with monolithically integrated optical waveguides. In: Conference on Lasers and Electro-Optics, 31 May - 05 Jun 2009, Baltimore, Maryland, USA. CTuM5. Optical Society of America. ISBN 978-1-55752-869-8
Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Martinez-Vazquez, R. and Osellame, R. and Ramponi, R. and Cerullo, G. and van Weeghel, R. and Besselink, G.A.J. and van den Vlekkert, H.H. and Pollnau, M. (2009) Fluorescence monitoring of capillary electrophoresis separation of biomolecules with monolithically integrated optical waveguides. In: CD of abstracts: European Lab-on-a-chip Congress, 18-19 may, 2009, Stockholm, Sweden. poster 1. Select Biosciences. ISBN not assigned
Dongre, C. and van Weerd, J. and Besselink, G.A.J. and Martinez-Vazquez, R. and Osellame, R. and Ramponi, R. and Cerullo, G. and van Weeghel, R. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2009) DNA Separation and Fluorescence Monitoring by Integrated Waveguides in an Optofluidic Chip. In: Proceedings of the 2009 Annual Symposium of the IEEE Photonics Benelux Chapter, 05-06 Nov 2009, Brussels, Belgium. pp. 49-52. VUBPress Brussels University Press. ISBN 978-90-5487-650-2
Dongre, C. and van Weerd, J. and van Weeghel, R. and Martinez-Vazquez, R. and Osellame, R. and Ramponi, R. and Cerullo, G. and Dekker, R. and Besselink, G.A.J. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2009) Multi-point, multi-wavelength fluorescence monitoring of DNA separation in a lab-on-a-chip with monolithically integrated femtosecond-laser-written waveguides. In: Proceedings of the European Conference on Biomedical Optics: Novel Optical Instrumentation for Biomedical Applications, 14-18 june, 2009, Munich, Germany. SPIE / OSA. ISBN not assigned
Dongre, C. and van Weerd, J. and van Weeghel, R. and Martinez-Vazquez, R. and Osellame, R. and Ramponi, R. and Cerullo, G. and Dekker, R. and Besselink, G.A.J. and van den Vlekkert, H.H. and Hoekstra, H.J.W.M. and Pollnau, M. (2009) Integrated fluorescence sensing in a lab-on-a-chip for DNA analysis. In: CD of abstracts: The Sense of Contact, 8 april 2009, Zeist, The Netherlands. FHI Federatie Van Technologiebranches. ISBN not assigned
Martinez-Vazquez, R. and Osellame, R. and Crespi, A. and Dongre, C. and Hoekstra, H.J.W.M. and Pollnau, M. and van den Vlekkert, H.H. and van Weeghel, R. and Watts, P. and Ramponi, R. and Cerullo, G. (2009) Three-dimensional photonic devices fabricated by ultrafast lasers for optical sensing in lab-on-a-chip. In: Proceedings of the SPIE, the international Society for Optical Engineering, 25-28 Januari 2009, San Jose. 720313. SPIE, Society of Photo-Optical Instrumentation Engineers. ISSN 0277-786X ISBN 978-0-81947-449-0
Martinez-Vazquez, R. and Osellame, R. and Cretich, M. and Chiari, M. and Dongre, C. and Hoekstra, H.J.W.M. and Pollnau, M. and van den Vlekkert, H.H. and Ramponi, R. and Cerullo, G. (2009) Optical sensing in microfluidic lab-on-a-chip by femtosecond-laser-written waveguides. Analytical and bioanalytical chemistry, 393 (4). pp. 1209-1216. ISSN 1618-2642 *** ISI Impact 3,125 ***
Martinez-Vazquez, R. and Osellame, R. and Cretich, M. and Chiari, M. and Dongre, C. and Hoekstra, H.J.W.M. and van den Vlekkert, H.H. and Ramponi, R. and Pollnau, M. and Cerullo, G. (2009) Optical sensing by femtosecond laser written waveguides in microfluidic chip for capillary electrophoresis. In: Conference on Lasers and Electro-Optics, 31 May - 05 June 2009, Baltimore, Maryland, USA. CThP4. Optical Society of America. ISBN 978-1-55752-869-8
Martinez-Vazquez, R. and Osellame, R. and Cretich, M. and Dongre, C. and Hoekstra, H.J.W.M. and van den Vlekkert, H.H. and Ramponi, R. and Pollnau, M. and Chiari, M. and Cerullo, G. (2009) Optical sensing in microchip capillary electrophoresis by femtosecond laser written waveguides. In: 23rd International Symposium on Microscale Bioseparations, Final Program and Abstract Book, 01-05 Feb 2009, Boston, Massachusetts, USA. 250. California Separation Science Society. ISBN not assigned
Martinez-Vazquez, R. and Osellame, R. and Nolli, D. and Dongre, C. and Van den Vlekkert, H.H. and Ramponi, R. and Pollnau, M. and Cerullo, G. (2009) Integration of femtosecond laser writen optical waveguides in a lab-on-chip. Lab on a chip, 9 (1). pp. 91-96. ISSN 1473-0197 *** ISI Impact 5,586 ***
Osellame, R. and Martinez-Vazquez, R. and Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Pollnau, M. and Ramponi, R. and Cerullo, G. (2009) Femtosecond laser fabrication for the integration of optical sensors in microfluidic lab-on-chip devices. In: Ultrafast Phenomena XVI. Springer Series in Chemical Physics 92 (12). Springer Verlag, Berlin, pp. 973-975. ISSN 0172-6218 ISBN 978-3-540-95946-5
Pollnau, M. and Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Martinez-Vazquez, R. and Osellame, R. and Ramponi, R. and Cerullo, G. and van Weeghel, R. and Besselink, G.A.J. and van den Vlekkert, H.H. (2009) Monitoring of DNA molecules in a lab on a chip with femtosecond laser written waveguides. (Invited) In: 39th Winter Colloquium on The Physics of Quantum Electronics, 04-08 Jan 2009, Snowbird, Utah, USA. 213. Texas A&M University. ISBN not assigned

2008

Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Martinez-Vazquez, R. and Osellame, R. and Ramponi, R. and Cerullo, G. and Van Weeghel, R. and Besselink, G.A.J. and van den Vlekkert, H.H. and Pollnau, M. (2008) Fluorescence monitoring of capilarry electrophoresis separation in a lab-on-a-chip with monolithically integrated waveguides. In: Proceedings of the 13th Annual Symposium of the IEEE LEOS Benelux Chapter, 27,28 November 2008, Enschede, The Netherlands. pp. 159-162. IEEE LEOS Benelux Chapter. ISBN 978-90-365-2768-2
Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Nolli, D. and Martinez-Vazquez, R. and Osellame, R. and Cerullo, G. and Besselink, G.A.J. and Pollnau, M. (2008) Femtosecond laser written waveguides for fluorescence sensing during microchip capillary electrophoresis. In: The Sense of Contact X, 09-04-2008, Zeist, The Netherlands. Technology Foundation STW. ISBN 978-90-74702-54-6
Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Nolli, D. and Martinez-Vazquez, R. and Osellame, R. and Cerullo, G. and Besselink, G.A.J. and Pollnau, M. (2008) Fluorescence sensing with femtosecond laser written waveguides in a capillary electrophoresis chip for monitoring molecular separation. In: Proceedings of the 14th European Conference on Integrated Optics (ECIO), 11-13 June 2008, Eindhoven, The Netherlands. pp. 107-110. Eindhoven University of Technology. ISBN 978-90-386-1317-8
Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Nolli, D. and Martinez-Vazquez, R. and Osellame, R. and Laporta, P. and Cerullo, G. and Besselink, G.A.J. and Van Weeghel, R. and Pollnau, M. (2008) Femtosecond laser written waveguides for fluorescence-sensing during microchip capillary electrophoresis. In: Book of Abstracts 9th European Conference on Optical Chemical Sensors and Biosensors (Europtrode IX), 30-3-2008-02-04-2008, Dublin, Ireland. pp. 116-117. Dublin City University. ISBN not assigned
Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Nolli, R. and Martinez-Vazquez, R. and Osellame, R. and Cerullo, G. and van Weeghel, R. and Besselink, G.A.J. and Pollnau, M. (2008) Monitoring of fluorescently labelled DNA during capilarry electrophoresis in a lab-on-a-chip with integrated waveguides. In: Proceedings: Annual meeting of the European Society (Topical Meeting 1-Biophotonics), 29 September - 2 October 2008, Paris, France. 1052. European Optical Society. ISBN 978-3-00-024188-8
Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Pollnau, M. and Martinez-Vazquez, R. and Osellame, R. and Cerullo, G. and Ramponi, R. and Van Weeghel, R. and Besselink, G.A.J. and Van den Vlekkert, H.H. (2008) Fluorescence monitoring of microchip capillary electrophoresis separation with monolithically integrated waveguides. Optics letters, 33 (21). pp. 2503-2505. ISSN 0146-9592 *** ISI Impact 3,040 ***
Martinez-Vazquez, R. and Nolli, D. and Osellame, R. and Dongre, C. and Pollnau, M. and Cerullo, G. and Ramponi, R. (2008) Integration of femtosecond laser written waveguides for optical detection in microfluidic chips. In: Proceedings: Annual meeting of the European Society (Topical Meeting 1- Biophotonics), 29 September - 2 October 2008, Paris, France. European Optical Society. ISBN 978-3-00-024188-8
Osellame, R. and Martinez-Vazquez, R. and Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Pollnau, M. and Ramponi, R. and Cerullo, G. (2008) Femtosecond laser fabrication for the integration of optical sensors in microfluidic lab-on-chip devices. In: XVI International Conference on Ultrafast Phenomena Conference Digest, 9-13 June 2008, Stresa (Lago Maggiore), Italy. Paper TUE2P.3. European Physical Society. ISBN 2-914771-51-7
Osellame, R. and Martinez-Vazquez, R. and Ramponi, R. and Cerullo, G. and Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Pollnau, M. (2008) Integrated Optical sensing in a lab-on-chip by femtosecond laser written waveguides. In: Conference on Lasers and Electro-Optics, OSA Technical Digest (CD), 4-9 May 2008, San Jose, California, U.S.A.. Paper CMHH3. Optical Society of America. ISBN 978-1-55752-859-9
Osellame, R. and Martinez-Vazquez, R. and Ramponi, R. and Cerullo, G. and Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Pollnau, M. (2008) Femtosecond laser microfabrication of optical waveguides in commercial microfluidic lab-on-a-chip. In: Microfluidics, BioMEMS, and Medical Microsystems VI, 19-24 January 2008, San Jose, California. 432. SPIE. ISBN not assigned

2007

Dongre, C. and Dekker, R. and Hoekstra, H.J.W.M. and Nolli, D. and Martinez-Vazquez, R. and Osellame, R. and Laporta, P. and Cerullo, G. and Pollnau, M. (2007) Characterization of femtosecond laser written waveguides for integrated biochemical sensing. In: 12th Annual Symposium IEEE/LEOS Benelux, 17-18 December 2007, Brussels, Belgium. pp. 27-30. IEEE LEOS Benelux Chapter. ISBN 978-2-9600753-0-4

2004

Apostolopoulos, V. and Laversenne, L. and Colomb, T. and Depeursinge, C. and Salathé, R.P. and Pollnau, M. and Osellame, R. and Cerullo, G. and Laporta, P. (2004) Femtosecond-irradiation-induced refractive-index changes and channel waveguiding in bulk Ti3+ : sapphire Applied physics letters, 85 (7). pp. 1122-1124. ISSN 0003-6951 *** ISI Impact 3,142 ***